c2v.datasets.Erickson_murine_development

c2v.datasets.Erickson_murine_development(perturbed=False, region='trunk', subset='all', file_path=None)

Dataset from [PMID: 40502176] with clonal atlas of murine development.

Parameters:

perturbed bool, optional

If the dataset should contain also experiments with mosaic knockouts, by default False.

region str, optional

Region of interest, one of trunk or head, by default “trunk”.

subset str, optional

Subset of interest (all, neurons, mesenchyme or other), by default “all”.

file_path str | Path | None, optional

Path where .h5ad-container will be stored, by default None.

Return type:

AnnData

Returns:

AnnData Annotated data matrix with the dataset