c2v.pl.predictors_comparison

c2v.pl.predictors_comparison(shapdata, group1, group2, varm_key=None, n_genes=10, cmap='RdBu_r', title=None, show=True, figsize=None, ax=None, return_fig=False, **kwargs)

Draws barplot of SHAP values for two groups.

Parameters:

shapdata sc.AnnData

Annotated data matrix with SHAP values in varm.

group1 str

Name of the first group.

group2 str

Name of the second group.

varm_key str | None, optional

Key in varm to SHAP values. Default is None.

n_genes int, optional

Number of top and bottom genes to plot. Default is 10.

cmap str, optional

Colormap to use. Default is “RdBu_r”.

title str | None, optional

Title for the plot. Default is None.

show bool, optional

Whether to show the plot. Default is True.

figsize tuple[float, float] | None, optional

Figure size. Default is None.

ax plt.Axes | None, optional

Axes object to draw on. Default is None.

return_fig bool, optional

Whether to return the figure object. Default is False.

**kwargs

Additional keyword arguments for ax.bar().

Return type:

Figure | Axes | None

Returns:

fig : plt.Figure | plt.Axes | None Figure object if return_fig is True, Axes if show is False, otherwise None.