c2v.datasets.Weinreb_in_vitro

c2v.datasets.Weinreb_in_vitro(embedding_type='gex', file_path=None)

Dataset from Weinreb et al. [PMID: 31974159] with in vitro hematopoiesis.

Parameters:

embedding_type Literal["gex", "c2v"], optional

Type of embedding to use, by default “gex”.

file_path str | Path | None, optional

Path where .h5ad-container will be stored, by default None.

Return type:

AnnData

Returns:

AnnData Annotated data matrix with the dataset.