Index A | B | C | E | F | G | H | I | L | M | N | P | R | S | T | V | W A align() (in module c2v.tl) associations() (in module c2v.tl) B barplot() (in module c2v.pl) C catboost() (in module c2v.tl) catboost_perfomance() (in module c2v.pl) clonal_nn() (in module c2v.tl) clone2vec() (in module c2v.tl) clone2vec_Poi() (in module c2v.tl) clone_size() (in module c2v.pl) clones2cells() (in module c2v.pl) clones_adata() (in module c2v.pp) clonocluster() (in module c2v.tl) connect_clones() (in module c2v.utils) correct_shap() (in module c2v.utils) E eigenvalue_test() (in module c2v.tl) embedding_axis() (in module c2v.pl) Erickson_murine_development() (in module c2v.datasets) F fancy_legend() (in module c2v.pl) find_mnn() (in module c2v.tl) G get_connectivity_matrix() (in module c2v.utils) graph() (in module c2v.pl) graph_associations() (in module c2v.tl) group_connectivity() (in module c2v.pl) (in module c2v.tl) group_kde() (in module c2v.pl) group_scatter() (in module c2v.pl) gs() (in module c2v.utils) H heatmap() (in module c2v.pl) I impute() (in module c2v.utils) integrate_data() (in module c2v.seurat) L laplacian_eigenmaps() (in module c2v.utils) Liu_NSCLC_CD8() (in module c2v.datasets) loss_history() (in module c2v.pl) M make_unique_clones() (in module c2v.pp) N nesting_clones() (in module c2v.pl) P pca_loadings() (in module c2v.pl) predictors_comparison() (in module c2v.pl) project_clone2vec() (in module c2v.tl) project_clone2vec_Poi() (in module c2v.tl) R read() (in module c2v.seurat) recalc_composition() (in module c2v.pp) regress_categories() (in module c2v.utils) S scaled_dotplot() (in module c2v.pl) scatter2vars() (in module c2v.pl) shap_volcano() (in module c2v.pl) small_cbar() (in module c2v.pl) smooth() (in module c2v.tl) stack_layers() (in module c2v.utils) T transfer_annotation() (in module c2v.pp) transfer_expression() (in module c2v.pp) V volcano() (in module c2v.pl) W Weinreb_in_vitro() (in module c2v.datasets)